Data and code for "Identifiability of environmental transmission parameters: quantifying dispersion and decay of infectious material using spatiotemporal transmission data""

Mathematica notebooks and data files package prepared as a supplement for publication “Identifiability of environmental transmission parameters: quantifying dispersion and decay of infectious material using spatiotemporal transmission data” Table of contents: Code S1_Engine_for_Identifiability of environmental transmission parameters.nb - all functions of the constraint maximization algorithm Code S2_Input_experimental_data_for_Identifiability of environmental transmission parameters.nb - input data for analysis of the combinations of the experimental data Code S3_Calibration_experimental_data_for_Identifiability of environmental transmission parameters.nb - calibration with the combinations of the experimental data Code S4_Input_and_Calibration_simulated_data_for_Identifiability of environmental transmission parameters.nb - generation of the input simulated data and calibration with the combinations of simulated data Code S5_Structural_identifibility_analysis_for_Identifiability of environmental transmission parameters.nb - code for structural identifiability analysis Data_package_identifiability.zip - data package with the outputs of the identifiability analysis; including profile likelihoods and simulated data