Comparative genomics including the basal pathogen Peronospora belbahrii reveal common evolutionary patterns and the monophyly of downy mildews in a paraphyletic Phytophthora

  • M. Thines (Creator)
  • R. Sharma (Creator)
  • Y.A. Rodenburg (Creator)
  • A. Gogleva (Creator)
  • H.S. Judelson (Creator)
  • X. Xia (Creator)
  • D.J. van den Hoogen (Creator)
  • M. Kitner (Creator)
  • J. Klein (Creator)
  • Dick de Ridder (Creator)
  • Michael Seidl (Creator)
  • G. van den Ackerveken (Creator)
  • Francine Govers (Creator)
  • S. Schornack (Creator)
  • D.J. Studholme (Creator)

Dataset

Description

The obligate biotrophic downy mildew constitute the most species rich group of oomycetes. So far only handful of genomes of this group of pathogens has been sequenced. Most likely due to low taxon sampling, until now phylogenomic studies with few taxa were in stark contrast to multigene phylogenies with a large number of accessions with respect to the relationships of downy mildews and Phytophthora species. In the current study, we sequenced the whole genome of the economically important basil pathogen Peronospora belbahrii, and performed in-depth comparative genomics and phylogenomics towards clarifying some aspects of downy mildew and Phytophthora evolution.
Date made available10 Aug 2018

Research Output

  • 1 Working paper

The genome of Peronospora belbahrii reveals high heterozygosity, a low number of canonical effectors and CT-rich promoters

Thines, M., Sharma, R., Rodenburg, Y. A., Gogleva, A., Judelson, H. S., Xia, X., van den Hoogen, D. J., Kitner, M., Klein, J., Neilen, M., de Ridder, D., Seidl, M. F., van den Ackerveken, G., Govers, F., Schornack, S. & Studholme, D. J., 31 Jul 2019, BioRxiv.

Research output: Working paperAcademic

  • Cite this

    Thines, M. (Creator), Sharma, R. (Creator), Rodenburg, Y. A. (Creator), Gogleva, A. (Creator), Judelson, H. S. (Creator), Xia, X. (Creator), van den Hoogen, D. J. (Creator), Kitner, M. (Creator), Klein, J. (Creator), de Ridder, D. (Creator), Seidl, M. F. (Creator), van den Ackerveken, G. (Creator), Govers, F. (Creator), Schornack, S. (Creator), Studholme, D. J. (Creator) (10 Aug 2018). Comparative genomics including the basal pathogen Peronospora belbahrii reveal common evolutionary patterns and the monophyly of downy mildews in a paraphyletic Phytophthora