Collection data, 16S microbiome and metabolome of Geodia barretti, Stryphnus fortis and Weberella bursa, in the Davis Strait

  • Karin Steffen (Creator)
  • Anak Agung Gede Indraningrat (Warmadewa University) (Creator)
  • Ida Erngren (Creator)
  • Jakob Haglöf (Creator)
  • Lisa Becking (Creator)
  • Ellen Kenchington (Creator)
  • Hauke Smidt (Creator)
  • Igor Yashayaev (Creator)
  • Curt Pettersson (Creator)
  • Paco Cárdenas (Creator)
  • Detmer Sipkema (Creator)

Dataset

Description

Collection data of the marine sponge specimens studied; three species: Geodia barretti, Stryphnus fortis and Weberella bursa. Collection data includes locality, depth, salinity, bottom temperature, gear, date, cruise and station# and a collection number for every specimen (DFO Canada collections). NCBI SRA# of the 16S gene amplicon sequencing of their microbiome. Numbers of the UPLC-HRMS runs (four different modes for every specimen: HILIC+, HILIC-, RP+ and RP-). The raw UPLC-HRMS datasets are deposited in the repository metabolights (www.ebi.ac.uk/metabolights/MTBLS1388). QC runs are Quality Control runs for the UPLC-HRMS experiment (also deposited in metabolights).
Date made available2019
PublisherWageningen University & Research
Temporal coverage2011 - 2015
Geographical coverageNorth Atlantic

Keywords

  • microbiome
  • Geodia barretti
  • marine sponges
  • Stryphnus fortis
  • metabolomics
  • Deep-sea
  • Weberella bursa

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